MLOC_77705 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.141223.929893.036223.28529
LEAShoots from the seedlings (10 cm shoot stage)1.898070.2531160.1352730.705571
INF1Young developing inflorescences (5mm)14.404612.47428.364949.85693
INF2Developing inflorescences (1-1.5 cm)11.915911.92719.6454912.2647
ROORoots from the seedlings (10 cm shoot stage)0.3021861.736521.421311.80209
NODDeveloping tillers at six leaf stage, 3rd internode0.009366630.02773140.01785980.0899264
CAR5Developing grain, bracts removed (5 DPA)4.125893.644273.204983.47418
CAR15Developing grain, bracts removed (15 DPA)0.7122340.6216040.7775481.5232



CDS Structure of MLOC_77705






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_77705.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_77705.1CUST_16442_PI427708080AvailableAvailablecontig_76857 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g34440.1 -1 4e-153 501 311/829 (38%) 13106.m03557 protein dnaJ domain containing protein, expressed
TAIR PP10 AT5G18750.1 -1 8e-77 276 212/708 (30%) DNAJ heat shock N-terminal domain-containing protein | chr5:6255177-6257831 FORWARD LENGTH=884