MLOC_77689 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains48.494635.464540.079640.1626
LEAShoots from the seedlings (10 cm shoot stage)31.27573.9885717.332413.9041
INF1Young developing inflorescences (5mm)1.523991.402091.249841.25299
INF2Developing inflorescences (1-1.5 cm)1.452951.617451.650641.80931
ROORoots from the seedlings (10 cm shoot stage)106.69257.420558.136567.8339
NODDeveloping tillers at six leaf stage, 3rd internode59.147830.54250.56976354.8826
CAR5Developing grain, bracts removed (5 DPA)0.5903320.2733060.502180.458537
CAR15Developing grain, bracts removed (15 DPA)0.7163280.2870560.7011251.39368



CDS Structure of MLOC_77689






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_77689.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355270NoneNoneNoneNone
MLOC_77689.1CUST_13538_PI427708083AvailableAvailablecontig_76778 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g42620.1 +2 0.0 585 281/380 (74%) 13104.m04212 protein uncharacterized protein At4g06744 precursor, putative, expressed
TAIR PP10 AT4G06744.1 +2 1e-108 340 178/344 (52%) Leucine-rich repeat (LRR) family protein | chr4:4070870-4072084 REVERSE LENGTH=404