MLOC_77688 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.9021270.8670930.8495291.07112
LEAShoots from the seedlings (10 cm shoot stage)2.049562.652861.373151.96983
INF1Young developing inflorescences (5mm)1.674751.462492.199861.62701
INF2Developing inflorescences (1-1.5 cm)3.510821.914452.379923.49205
ROORoots from the seedlings (10 cm shoot stage)0.1204171.21620.7467661.27203
NODDeveloping tillers at six leaf stage, 3rd internode1.891222.126521.480778.60345
CAR5Developing grain, bracts removed (5 DPA)2.237982.426162.941712.78517
CAR15Developing grain, bracts removed (15 DPA)0.7102421.181450.8136452.06166



CDS Structure of MLOC_77688






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_77688.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_77688.2CUST_13296_PI427708083AvailableAvailablecontig_76767 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g12450.1 +2 4e-17 84 41/54 (76%) 13103.m01426 protein nucleoporin, putative, expressed
TAIR PP10None-----