- Predicted Gene MLOC_77683
MLOC_77683 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.50305 | 9.90616 | 8.29783 | 8.56614 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 37.4112 | 27.4631 | 21.712 | 23.9736 |
| INF1 | Young developing inflorescences (5mm) | 20.21 | 16.5622 | 17.8483 | 16.6027 |
| INF2 | Developing inflorescences (1-1.5 cm) | 14.1571 | 15.4875 | 14.4041 | 17.5964 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.821699 | 1.84306 | 2.62515 | 2.25418 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 5.76092 | 5.81419 | 4.85925 | 16.3088 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 15.6325 | 13.9507 | 12.7678 | 15.0743 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.05412 | 2.03148 | 2.19075 | 5.34 |
CDS Structure of MLOC_77683
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_77683.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g01400.1 |
-3 |
8e-179 |
530 |
256/265 (97%) |
13106.m00042 protein glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor, putative, expressed |
| TAIR PP10 |
AT3G48110.1 |
-3 |
2e-164 |
492 |
234/265 (88%) |
| Symbols: EDD1, EDD | glycine-tRNA ligases | chr3:17763111-17770964 FORWARD LENGTH=1067 |