- Predicted Gene MLOC_77643
MLOC_77643 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.0039 | 3.13752 | 2.64767 | 1.83348 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 14.5747 | 15.9932 | 16.1784 | 9.17313 |
| INF1 | Young developing inflorescences (5mm) | 2.41853 | 3.07394 | 3.33097 | 1.57217 |
| INF2 | Developing inflorescences (1-1.5 cm) | 4.55359 | 3.29378 | 2.5117 | 2.94164 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.64327 | 1.0324 | 1.01528 | 0.945104 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 6.45192 | 4.94624 | 6.19492 | 11.4913 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.26499 | 3.05109 | 3.88949 | 1.91914 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.17752 | 0.541748 | 1.40715 | 1.63606 |
CDS Structure of MLOC_77643
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_77643.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g15460.2 |
-1 |
2e-52 |
179 |
91/112 (81%) |
13108.m01652 protein preprotein translocase subunit secY, putative, expressed |
| TAIR PP10 |
AT2G18710.1 |
-1 |
7e-49 |
173 |
88/112 (79%) |
| Symbols: SCY1 | SECY homolog 1 | chr2:8112231-8114452 REVERSE LENGTH=551 |