MLOC_77598 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.764415.03949.7791611.51
LEAShoots from the seedlings (10 cm shoot stage)13.5678.055889.804948.03185
INF1Young developing inflorescences (5mm)17.293618.244617.574813.9466
INF2Developing inflorescences (1-1.5 cm)10.112114.38512.888112.3254
ROORoots from the seedlings (10 cm shoot stage)3.864326.3967612.01396.56886
NODDeveloping tillers at six leaf stage, 3rd internode7.385267.6271512.830221.4374
CAR5Developing grain, bracts removed (5 DPA)7.119858.076217.936596.6954
CAR15Developing grain, bracts removed (15 DPA)2.077611.623721.723944.12552



CDS Structure of MLOC_77598






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_77598.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251156.1NoneNoneNoneNone
AK360564NoneNoneNoneNone
MLOC_77598.1CUST_6650_PI427708080AvailableAvailablecontig_76334 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g42720.2 +2 6e-54 174 80/97 (82%) 13101.m04397 protein expressed protein
TAIR PP10None-----