- Predicted Gene MLOC_77596
MLOC_77596 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 58.9891 | 59.4229 | 62.3822 | 63.2238 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 31.5323 | 31.0917 | 29.5773 | 27.2998 |
| INF1 | Young developing inflorescences (5mm) | 75.794 | 84.1279 | 85.576 | 72.9843 |
| INF2 | Developing inflorescences (1-1.5 cm) | 56.2581 | 66.1459 | 66.1515 | 70.1965 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 41.4118 | 39.839 | 71.6999 | 57.4211 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 29.2899 | 15.8617 | 14.2799 | 47.9584 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 33.0956 | 40.7765 | 34.6526 | 37.1202 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 7.44735 | 6.51386 | 7.50951 | 17.8115 |
CDS Structure of MLOC_77596
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_77596.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g64690.1 |
+3 |
7e-53 |
169 |
90/120 (75%) |
13101.m06970 protein LSM domain containing protein, expressed |
| TAIR PP10 |
AT1G21190.1 |
+3 |
2e-49 |
159 |
82/118 (69%) |
Small nuclear ribonucleoprotein family protein | chr1:7419989-7420856 REVERSE LENGTH=97 |
