MLOC_77595 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains85.805562.243956.840174.0713
LEAShoots from the seedlings (10 cm shoot stage)4.450318.5502411.23597.2279
INF1Young developing inflorescences (5mm)6.432754.953624.277354.91823
INF2Developing inflorescences (1-1.5 cm)0.9997420.5161962.570971.48039
ROORoots from the seedlings (10 cm shoot stage)97.147978.262855.569598.9234
NODDeveloping tillers at six leaf stage, 3rd internode25.920523.52179.4167655.9322
CAR5Developing grain, bracts removed (5 DPA)6.134013.916033.988045.20708
CAR15Developing grain, bracts removed (15 DPA)5.812495.414344.2560814.2558



CDS Structure of MLOC_77595






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_77595.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_77595.1CUST_16424_PI427708080AvailableAvailablecontig_76326 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g36260.1 -1 4e-131 381 191/225 (85%) 13105.m03810 protein soluble inorganic pyrophosphatase, putative, expressed
TAIR PP10 AT1G01050.1 -1 6e-124 362 176/207 (85%) | Symbols: AtPPa1, PPa1 | pyrophosphorylase 1 | chr1:31382-32670 REVERSE LENGTH=212