MLOC_77571 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0.018571600.02392050.0353131
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.03979990.021467600.0611202
NODDeveloping tillers at six leaf stage, 3rd internode00.0027997800.0295793
CAR5Developing grain, bracts removed (5 DPA)0.2156490.09097880.3200020.213446
CAR15Developing grain, bracts removed (15 DPA)0.4999610.5334270.3714631.22786



CDS Structure of MLOC_77571






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_77571.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_77571.1CUST_16421_PI427708080AvailableAvailablecontig_76227 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g04590.1 -3 6e-36 142 113/312 (36%) 13108.m00440 protein csAtPR5, putative
TAIR PP10None-----