MLOC_77559 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.401711.585412.977514.0071
LEAShoots from the seedlings (10 cm shoot stage)15.97424.433755.686257.53256
INF1Young developing inflorescences (5mm)11.797915.546813.941914.2229
INF2Developing inflorescences (1-1.5 cm)5.853596.620687.258268.63651
ROORoots from the seedlings (10 cm shoot stage)3.653894.5783413.18047.50909
NODDeveloping tillers at six leaf stage, 3rd internode1.86751.533791.031474.70555
CAR5Developing grain, bracts removed (5 DPA)4.378854.129753.156724.57354
CAR15Developing grain, bracts removed (15 DPA)0.1904740.1098190.2748470.501876



CDS Structure of MLOC_77559






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_77559.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248828.1NoneNoneNoneNone
AK357107NoneNoneNoneNone
MLOC_77559.2CUST_6648_PI427708080AvailableAvailablecontig_76167 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g38230.2 -3 0.0 530 258/316 (82%) 13105.m03999 protein oxidoreductase, aldo/keto reductase family protein, putative, expressed
TAIR PP10 AT2G37790.1 -3 2e-155 445 211/307 (69%) NAD(P)-linked oxidoreductase superfamily protein | chr2:15838838-15840752 FORWARD LENGTH=314