- Predicted Gene MLOC_77559
MLOC_77559 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 13.4017 | 11.5854 | 12.9775 | 14.0071 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 15.9742 | 4.43375 | 5.68625 | 7.53256 |
INF1 | Young developing inflorescences (5mm) | 11.7979 | 15.5468 | 13.9419 | 14.2229 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.85359 | 6.62068 | 7.25826 | 8.63651 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.65389 | 4.57834 | 13.1804 | 7.50909 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.8675 | 1.53379 | 1.03147 | 4.70555 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.37885 | 4.12975 | 3.15672 | 4.57354 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.190474 | 0.109819 | 0.274847 | 0.501876 |
CDS Structure of MLOC_77559
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_77559.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g38230.2 |
-3 |
0.0 |
530 |
258/316 (82%) |
13105.m03999 protein oxidoreductase, aldo/keto reductase family protein, putative, expressed |
TAIR PP10 |
AT2G37790.1 |
-3 |
2e-155 |
445 |
211/307 (69%) |
NAD(P)-linked oxidoreductase superfamily protein | chr2:15838838-15840752 FORWARD LENGTH=314 |