- Predicted Gene MLOC_77548
MLOC_77548 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.95347 | 1.33481 | 2.09412 | 1.72543 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.87574 | 3.56353 | 4.88925 | 3.49729 |
| INF1 | Young developing inflorescences (5mm) | 5.3668 | 7.37584 | 6.96918 | 5.97924 |
| INF2 | Developing inflorescences (1-1.5 cm) | 10.3986 | 10.3222 | 11.2188 | 11.7386 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.42128 | 1.89862 | 2.90652 | 2.34797 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 7.56256 | 13.3154 | 16.3336 | 35.7908 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 4.07666 | 4.45799 | 4.77504 | 4.47581 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.625908 | 0.859723 | 1.12443 | 2.09377 |
CDS Structure of MLOC_77548
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_77548.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g37790.1 |
+1 |
5e-16 |
81 |
37/60 (62%) |
13101.m03843 protein expressed protein |
| TAIR PP10 |
AT3G21295.1 |
+1 |
4e-13 |
71 |
35/62 (56%) |
Tudor/PWWP/MBT superfamily protein | chr3:7489635-7492296 FORWARD LENGTH=645 |