- Predicted Gene MLOC_77536
MLOC_77536 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_77536_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_77536_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 359.124 | 237.478 | 252.21 | 253.654 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 192.73 | 93.3175 | 190.863 | 116.8 |
INF1 | Young developing inflorescences (5mm) | 29.7619 | 40.3272 | 45.9473 | 32.7361 |
INF2 | Developing inflorescences (1-1.5 cm) | 39.6557 | 41.5946 | 39.7622 | 43.8791 |
ROO | Roots from the seedlings (10 cm shoot stage) | 888.286 | 483.125 | 392.782 | 526.719 |
NOD | Developing tillers at six leaf stage, 3rd internode | 305.716 | 304.879 | 104.569 | 563.796 |
CAR5 | Developing grain, bracts removed (5 DPA) | 59.1053 | 59.2811 | 53.9023 | 56.0769 |
CAR15 | Developing grain, bracts removed (15 DPA) | 59.4698 | 69.0594 | 55.0532 | 153.739 |
CDS Structure of MLOC_77536
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_77536.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g44180.1 |
-3 |
3e-20 |
84 |
53/57 (93%) |
13107.m04647 protein OsRCI2-10 - Hydrophobic protein LTI6A, expressed |
TAIR PP10 |
AT3G05890.1 |
-3 |
4e-14 |
66 |
26/36 (72%) |
| Symbols: RCI2B | Low temperature and salt responsive protein family | chr3:1758179-1758452 REVERSE LENGTH=54 |