MLOC_77534 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.25811.721326.261911.1755
LEAShoots from the seedlings (10 cm shoot stage)3.1727305.136612.87472
INF1Young developing inflorescences (5mm)15.712121.14116.725511.5927
INF2Developing inflorescences (1-1.5 cm)5.018310.4316.074396.85603
ROORoots from the seedlings (10 cm shoot stage)3.885475.1464112.19064.77653
NODDeveloping tillers at six leaf stage, 3rd internode8.693576.370172.6348111.3272
CAR5Developing grain, bracts removed (5 DPA)17.179212.626117.58912.6647
CAR15Developing grain, bracts removed (15 DPA)1.046273.5203104.14246



CDS Structure of MLOC_77534






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_77534.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_77534.1NoneAvailableAvailablecontig_76077 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g26850.3 -2 4e-13 64 29/33 (88%) 13111.m02571 protein erythronate-4-phosphate dehydrogenase, putative, expressed
TAIR PP10 AT4G13940.4 -2 3e-14 66 30/33 (91%) | Symbols: HOG1, SAHH1 | S-adenosyl-L-homocysteine hydrolase | chr4:8054931-8056763 FORWARD LENGTH=325