- Predicted Gene MLOC_77520
MLOC_77520 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_77520_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_77520_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.98689 | 2.46747 | 3.22335 | 3.11406 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.1611 | 6.87784 | 6.93731 | 5.96914 |
INF1 | Young developing inflorescences (5mm) | 1.72102 | 1.6787 | 1.81044 | 1.56156 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.03767 | 2.35154 | 3.49854 | 3.33076 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.45535 | 4.05432 | 4.3039 | 5.50552 |
NOD | Developing tillers at six leaf stage, 3rd internode | 5.93639 | 8.47322 | 9.76649 | 31.4256 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.5574 | 5.93045 | 6.5433 | 6.71827 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.39622 | 3.17241 | 3.24966 | 8.03638 |
CDS Structure of MLOC_77520
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_77520.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g46020.1 |
-1 |
8e-127 |
384 |
243/450 (54%) |
13104.m04622 protein GATA zinc finger domain containing protein, expressed |
TAIR PP10 |
AT4G17570.3 |
-1 |
4e-57 |
202 |
137/316 (43%) |
| Symbols: GATA26 | GATA transcription factor 26 | chr4:9784329-9786974 REVERSE LENGTH=514 |