MLOC_77452 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.564835.137344.670793.58542
LEAShoots from the seedlings (10 cm shoot stage)22.943841.221253.794228.9527
INF1Young developing inflorescences (5mm)2.875392.516033.81372.11984
INF2Developing inflorescences (1-1.5 cm)4.066152.589365.267683.05794
ROORoots from the seedlings (10 cm shoot stage)21.028220.801824.689120.2331
NODDeveloping tillers at six leaf stage, 3rd internode79.593817.847152.586595.4473
CAR5Developing grain, bracts removed (5 DPA)8.116618.4969911.8397.76047
CAR15Developing grain, bracts removed (15 DPA)1.270041.789941.437313.11809



CDS Structure of MLOC_77452






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_77452.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355753NoneNoneNoneNone
MLOC_77452.2CUST_6638_PI427708080AvailableAvailablecontig_75700 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g53730.1 +3 4e-61 203 118/182 (65%) 13101.m05631 protein expressed protein
TAIR PP10 AT2G25870.1 -1 7e-21 97 47/56 (84%) haloacid dehalogenase-like hydrolase family protein | chr2:11031159-11034302 FORWARD LENGTH=584