- Predicted Gene MLOC_77387
MLOC_77387 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_77387_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_77387_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 14.1633 | 17.0093 | 16.6081 | 14.7308 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 20.3051 | 16.9103 | 20.3862 | 15.4901 |
INF1 | Young developing inflorescences (5mm) | 26.6506 | 28.1618 | 30.3692 | 21.1655 |
INF2 | Developing inflorescences (1-1.5 cm) | 35.7378 | 38.9726 | 38.0764 | 36.8975 |
ROO | Roots from the seedlings (10 cm shoot stage) | 15.6562 | 20.7893 | 16.3191 | 21.5265 |
NOD | Developing tillers at six leaf stage, 3rd internode | 16.0418 | 20.7665 | 23.0819 | 65.5248 |
CAR5 | Developing grain, bracts removed (5 DPA) | 27.1519 | 25.8715 | 28.9084 | 23.3395 |
CAR15 | Developing grain, bracts removed (15 DPA) | 16.6954 | 15.6933 | 16.1002 | 32.2618 |
CDS Structure of MLOC_77387
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_77387.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g15020.2 |
-2 |
3e-79 |
281 |
135/167 (81%) |
13101.m01663 protein lissencephaly type-1-like homology motif, putative, expressed |
TAIR PP10 |
AT3G16830.1 |
-2 |
1e-73 |
263 |
123/166 (74%) |
| Symbols: TPR2 | TOPLESS-related 2 | chr3:5731709-5737531 FORWARD LENGTH=1131 |