MLOC_77359 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.354914.615813.605214.0893
LEAShoots from the seedlings (10 cm shoot stage)6.544972.265221.881653.31166
INF1Young developing inflorescences (5mm)45.210445.05939.172137.3904
INF2Developing inflorescences (1-1.5 cm)34.778244.019235.457544.4434
ROORoots from the seedlings (10 cm shoot stage)2.643778.98916.9676610.6123
NODDeveloping tillers at six leaf stage, 3rd internode1.194121.093832.698515.19947
CAR5Developing grain, bracts removed (5 DPA)12.021511.239312.748212.2038
CAR15Developing grain, bracts removed (15 DPA)1.640830.8070161.989913.25842



CDS Structure of MLOC_77359






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_77359.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375348NoneNoneNoneNone
MLOC_77359.2CUST_18468_PI427708080AvailableAvailablecontig_74489 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g28260.1 -1 0.0 1229 695/905 (77%) 13104.m02676 protein Kinesin motor domain domain containing protein, expressed
TAIR PP10 AT3G23670.2 -1 2e-178 553 344/786 (44%) | Symbols: PAKRP1L, KINESIN-12B | phragmoplast-associated kinesin-related protein, putative | chr3:8519290-8525055 FORWARD LENGTH=971