MLOC_77343 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.763811.984711.142111.22209
LEAShoots from the seedlings (10 cm shoot stage)2.909473.467054.621962.14937
INF1Young developing inflorescences (5mm)2.641692.49533.93041.66899
INF2Developing inflorescences (1-1.5 cm)10.66386.085066.98826.42682
ROORoots from the seedlings (10 cm shoot stage)1.769584.397592.812912.87466
NODDeveloping tillers at six leaf stage, 3rd internode1.384563.051544.210257.07918
CAR5Developing grain, bracts removed (5 DPA)5.176025.075363.931843.1671
CAR15Developing grain, bracts removed (15 DPA)1.788513.007272.890363.63333



CDS Structure of MLOC_77343






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_77343.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_77343.1NoneAvailableAvailablecontig_75214 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g42380.1 -1 1e-20 61 33/70 (47%) 13106.m04433 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----