- Predicted Gene MLOC_77340
MLOC_77340 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_77340_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_77340_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.148347 | 0 | 0.0616237 | 0.118518 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
INF1 | Young developing inflorescences (5mm) | 0.0379062 | 0.0404231 | 0.221857 | 0.0834702 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.256123 | 0.257567 | 0.0607519 | 0.215101 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.445182 | 0.221254 | 0.3022 | 0.306611 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.3623 | 1.49077 | 1.1576 | 3.28939 |
CDS Structure of MLOC_77340
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_77340.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g62490.1 |
+1 |
2e-25 |
75 |
44/82 (54%) |
13103.m06898 protein prohibitin-2, putative, expressed |
TAIR PP10 |
AT1G03860.3 |
+1 |
2e-34 |
72 |
42/73 (58%) |
| Symbols: ATPHB2, PHB2 | prohibitin 2 | chr1:979611-981157 REVERSE LENGTH=286 |