MLOC_77291 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.108433.629533.982294.21579
LEAShoots from the seedlings (10 cm shoot stage)1.046080.975741.87530.963513
INF1Young developing inflorescences (5mm)3.093491.93282.146852.06539
INF2Developing inflorescences (1-1.5 cm)0.5863580.4474510.4734370.556129
ROORoots from the seedlings (10 cm shoot stage)7.921963.855051.905294.35401
NODDeveloping tillers at six leaf stage, 3rd internode10.46197.1491610.217719.8414
CAR5Developing grain, bracts removed (5 DPA)0.9084570.5866840.6152250.657011
CAR15Developing grain, bracts removed (15 DPA)0.1565780.1770040.1365670.410119



CDS Structure of MLOC_77291






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_77291.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367737NoneNoneNoneNone
MLOC_77291.2CUST_6630_PI427708080AvailableAvailablecontig_7505 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g44000.1 -1 5e-179 521 305/348 (88%) 13102.m04895 protein amino acid kinase, putative
TAIR PP10 AT3G57560.1 -1 1e-129 393 202/279 (72%) | Symbols: NAGK | N-acetyl-l-glutamate kinase | chr3:21311164-21312207 REVERSE LENGTH=347