MLOC_77258 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.464919.517349.7181710.9178
LEAShoots from the seedlings (10 cm shoot stage)6.784986.261596.522996.05621
INF1Young developing inflorescences (5mm)11.728310.735611.186111.0854
INF2Developing inflorescences (1-1.5 cm)9.114299.0310611.563212.5059
ROORoots from the seedlings (10 cm shoot stage)14.168717.514417.493624.009
NODDeveloping tillers at six leaf stage, 3rd internode8.821019.575626.9592932.4931
CAR5Developing grain, bracts removed (5 DPA)6.378096.422776.605827.57533
CAR15Developing grain, bracts removed (15 DPA)3.164463.325272.851988.6719



CDS Structure of MLOC_77258






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_77258.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375802NoneNoneNoneNone
MLOC_77258.2CUST_6627_PI427708080AvailableAvailablecontig_7495 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g40570.2 +2 2e-132 394 228/355 (64%) 13112.m04222 protein WRKY transcription factor, putative, expressed
TAIR PP10 AT3G04670.1 +2 7e-69 228 153/337 (45%) | Symbols: WRKY39, ATWRKY39 | WRKY DNA-binding protein 39 | chr3:1266530-1267691 REVERSE LENGTH=330