MLOC_77257 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains20.474216.036612.642417.7171
LEAShoots from the seedlings (10 cm shoot stage)12.64035.372365.012546.31167
INF1Young developing inflorescences (5mm)16.719314.726717.488716.5848
INF2Developing inflorescences (1-1.5 cm)12.031416.906717.666721.1571
ROORoots from the seedlings (10 cm shoot stage)28.876618.207721.34524.1436
NODDeveloping tillers at six leaf stage, 3rd internode9.72817.12848.9000945.1042
CAR5Developing grain, bracts removed (5 DPA)19.798321.225317.63423.7106
CAR15Developing grain, bracts removed (15 DPA)5.397356.164735.6169317.0086



CDS Structure of MLOC_77257






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_77257.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372756NoneNoneNoneNone
MLOC_77257.1CUST_6626_PI427708080AvailableAvailablecontig_74945 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g32290.2 +2 0.0 523 277/372 (74%) 13109.m07548 protein FAD dependent oxidoreductase domain containing protein, expressed
TAIR PP10 AT2G24580.1 +2 1e-110 338 206/405 (51%) FAD-dependent oxidoreductase family protein | chr2:10444928-10446178 REVERSE LENGTH=416