MLOC_77253 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.974414.044910.569313.8989
LEAShoots from the seedlings (10 cm shoot stage)7.956395.7167111.6017.09887
INF1Young developing inflorescences (5mm)23.725824.664320.208319.2746
INF2Developing inflorescences (1-1.5 cm)15.867315.908715.880116.8727
ROORoots from the seedlings (10 cm shoot stage)11.260814.199511.919315.9436
NODDeveloping tillers at six leaf stage, 3rd internode1.188161.131592.806454.23043
CAR5Developing grain, bracts removed (5 DPA)11.655513.708113.364812.3104
CAR15Developing grain, bracts removed (15 DPA)1.215311.393371.584143.16738



CDS Structure of MLOC_77253






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_77253.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_77253.1CUST_16390_PI427708080AvailableAvailablecontig_7491 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g56830.2 -3 3e-157 448 208/243 (86%) 13103.m06213 protein ad-003, putative, expressed
TAIR PP10 AT5G44450.1 -3 1e-110 329 158/246 (64%) methyltransferases | chr5:17914360-17916017 REVERSE LENGTH=334