- Predicted Gene MLOC_77193
MLOC_77193 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.32743 | 7.34079 | 6.3768 | 7.68738 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 9.13495 | 11.9755 | 12.429 | 9.71982 |
| INF1 | Young developing inflorescences (5mm) | 4.59771 | 9.55075 | 13.0228 | 8.19013 |
| INF2 | Developing inflorescences (1-1.5 cm) | 4.43219 | 5.14416 | 3.00224 | 5.99472 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 17.3574 | 6.40277 | 7.90702 | 11.258 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 7.8249 | 12.9927 | 9.88848 | 41.3349 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 7.76279 | 5.54245 | 5.76716 | 6.95641 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.46175 | 3.08177 | 0.744308 | 6.65563 |
CDS Structure of MLOC_77193
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_77193.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g01170.1 |
-2 |
3e-35 |
128 |
60/72 (83%) |
13102.m00028 protein HECT-domain domain containing protein, expressed |
| TAIR PP10 |
AT4G38600.1 |
-2 |
7e-29 |
110 |
50/72 (69%) |
| Symbols: KAK, UPL3 | HEAT repeat ;HECT-domain (ubiquitin-transferase) | chr4:18041503-18049292 REVERSE LENGTH=1888 |