MLOC_77192 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.040889.634668.7068810.8895
LEAShoots from the seedlings (10 cm shoot stage)16.706116.522313.565316.2601
INF1Young developing inflorescences (5mm)26.553727.660526.583227.4185
INF2Developing inflorescences (1-1.5 cm)59.339852.221246.727471.9792
ROORoots from the seedlings (10 cm shoot stage)5.910512.2948.736819.4265
NODDeveloping tillers at six leaf stage, 3rd internode7.2850911.3910.016647.7898
CAR5Developing grain, bracts removed (5 DPA)30.47427.294727.850435.848
CAR15Developing grain, bracts removed (15 DPA)19.934917.91218.333552.0146



CDS Structure of MLOC_77192






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_77192.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_77192.1CUST_16383_PI427708080AvailableAvailablecontig_7474 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g19810.2 +2 4e-92 324 207/479 (43%) 13111.m02007 protein PWWP domain containing protein, expressed
TAIR PP10 AT3G09670.2 +2 4e-38 154 84/189 (44%) Tudor/PWWP/MBT superfamily protein | chr3:2966637-2968817 FORWARD LENGTH=726