- Predicted Gene MLOC_77135
MLOC_77135 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0 | 0 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.900211 | 0.320373 | 0.370003 | 0.434761 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0.0459507 | 0 | 0.0550518 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.18718 | 0.492211 | 0.0506657 | 0.994939 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.184415 | 0 | 0.0644882 | 0.133317 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.0579511 | 0 | 0 | 0.210443 |
CDS Structure of MLOC_77135
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_77135.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g36850.1 |
+2 |
2e-12 |
68 |
34/90 (38%) |
13107.m03784 protein transposon protein, putative, Pong sub-class |
| TAIR PP10 |
AT2G13770.1 |
+2 |
1e-13 |
72 |
42/129 (33%) |
CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); Has 451 Blast hits to 352 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 8; Plants - 388; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). | chr2:5736603-5737847 FORWARD LENGTH=343 |