- Predicted Gene MLOC_77132
MLOC_77132 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_77132_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_77132_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 63.6232 | 48.6464 | 65.8682 | 58.3536 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.760542 | 3.97493 | 12.1893 | 5.16936 |
INF1 | Young developing inflorescences (5mm) | 0 | 0.0198839 | 0.0218004 | 0.0413093 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0186341 | 0 | 0 | 0.0232919 |
ROO | Roots from the seedlings (10 cm shoot stage) | 76.3356 | 75.1299 | 77.6439 | 91.3242 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.00351347 | 0.00621413 | 0.0224598 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.13409 | 0.083977 | 0.39017 | 0.210918 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.863278 | 1.08008 | 0.787511 | 2.42781 |
CDS Structure of MLOC_77132
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_77132.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g35550.1 |
+1 |
0.0 |
601 |
337/534 (63%) |
13106.m03670 protein retrotransposon protein, putative, Ty1-copia subclass, expressed |
TAIR PP10 |
AT2G34790.1 |
+1 |
2e-125 |
386 |
241/543 (44%) |
| Symbols: MEE23, EDA28 | FAD-binding Berberine family protein | chr2:14673998-14677237 REVERSE LENGTH=532 |