MLOC_77079 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.0292781000.0203608
LEAShoots from the seedlings (10 cm shoot stage)0.2390152.252841.606471.23415
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.9081250.06399511.306010.372002
NODDeveloping tillers at six leaf stage, 3rd internode0.0167401000.00104141
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0.7972590.9017780.5641682.13117



CDS Structure of MLOC_77079






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_77079.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251751.1NoneNoneNoneNone
MLOC_77079.2CUST_6621_PI427708080AvailableAvailablecontig_74219 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g55010.1 +1 0.0 719 347/462 (75%) 13103.m05973 protein UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed
TAIR PP10 AT3G02100.1 +1 1e-112 347 186/460 (40%) UDP-Glycosyltransferase superfamily protein | chr3:368840-370484 REVERSE LENGTH=464