MLOC_7704 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.554974.405323.629723.74437
LEAShoots from the seedlings (10 cm shoot stage)3.225941.579021.599531.96916
INF1Young developing inflorescences (5mm)12.796813.952511.838610.3618
INF2Developing inflorescences (1-1.5 cm)10.706312.365210.168912.3148
ROORoots from the seedlings (10 cm shoot stage)1.205622.873631.786023.35363
NODDeveloping tillers at six leaf stage, 3rd internode1.257321.528761.179465.66917
CAR5Developing grain, bracts removed (5 DPA)6.230145.51486.682335.94284
CAR15Developing grain, bracts removed (15 DPA)1.018921.507070.8792272.46701



CDS Structure of MLOC_7704






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_7704.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_7704.1CUST_16364_PI427708080AvailableAvailablecontig_139900 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g22190.1 +1 0.0 856 500/794 (63%) 13103.m02667 protein expressed protein
TAIR PP10 AT5G49110.1 +1 2e-108 369 290/890 (33%) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:19900203-19905925 FORWARD LENGTH=1469