MLOC_7704 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_7704_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 2.55497 | 4.40532 | 3.62972 | 3.74437 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.22594 | 1.57902 | 1.59953 | 1.96916 |
INF1 | Young developing inflorescences (5mm) | 12.7968 | 13.9525 | 11.8386 | 10.3618 |
INF2 | Developing inflorescences (1-1.5 cm) | 10.7063 | 12.3652 | 10.1689 | 12.3148 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.20562 | 2.87363 | 1.78602 | 3.35363 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.25732 | 1.52876 | 1.17946 | 5.66917 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.23014 | 5.5148 | 6.68233 | 5.94284 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.01892 | 1.50707 | 0.879227 | 2.46701 |
CDS Structure of MLOC_7704
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_7704.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g22190.1 |
+1 |
0.0 |
856 |
500/794 (63%) |
13103.m02667 protein expressed protein |
TAIR PP10 |
AT5G49110.1 |
+1 |
2e-108 |
369 |
290/890 (33%) |
unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:19900203-19905925 FORWARD LENGTH=1469 |