MLOC_7694 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.0316253000.0211954
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.039744700.02270030.0486308
ROORoots from the seedlings (10 cm shoot stage)0.1247110.07016720.06469490.0825035
NODDeveloping tillers at six leaf stage, 3rd internode00.01016540.01317160.0383646
CAR5Developing grain, bracts removed (5 DPA)73.891285.736572.292775.3314
CAR15Developing grain, bracts removed (15 DPA)12.065113.479115.400234.1198



CDS Structure of MLOC_7694






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_7694.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_7694.1CUST_16354_PI427708080AvailableAvailablecontig_139877 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g49930.1 -3 1e-127 392 206/380 (54%) 13105.m05350 protein GRAS family transcription factor domain containing protein, expressed
TAIR PP10 AT3G03450.1 -3 5e-80 268 151/347 (44%) | Symbols: RGL2 | RGA-like 2 | chr3:819636-821279 REVERSE LENGTH=547