MLOC_76930 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains21.80716.366919.795119.3565
LEAShoots from the seedlings (10 cm shoot stage)14.77854.038557.493077.08558
INF1Young developing inflorescences (5mm)5.35565.415437.403645.76232
INF2Developing inflorescences (1-1.5 cm)4.851476.438827.009327.37363
ROORoots from the seedlings (10 cm shoot stage)26.056817.874816.469121.5528
NODDeveloping tillers at six leaf stage, 3rd internode44.004272.122859.2351186.76
CAR5Developing grain, bracts removed (5 DPA)16.443917.754216.582418.5518
CAR15Developing grain, bracts removed (15 DPA)0.4713130.6318430.8989031.76034



CDS Structure of MLOC_76930






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76930.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369514NoneNoneNoneNone
MLOC_76930.1CUST_6616_PI427708080AvailableAvailablecontig_73566 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g70180.1 +3 0.0 714 330/387 (85%) 13101.m07617 protein exostosin family domain containing protein, expressed
TAIR PP10 AT5G61840.1 +3 0.0 667 307/384 (80%) | Symbols: GUT1 | Exostosin family protein | chr5:24839365-24841703 REVERSE LENGTH=415