MLOC_76890 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.04548040.08394840.3374650.421724
LEAShoots from the seedlings (10 cm shoot stage)1.500892.498395.100733.55133
INF1Young developing inflorescences (5mm)000.04287110.202999
INF2Developing inflorescences (1-1.5 cm)0.03484320.03256890.0428870.229479
ROORoots from the seedlings (10 cm shoot stage)000.1184720.487594
NODDeveloping tillers at six leaf stage, 3rd internode0.3819180.2371320.9647322.87899
CAR5Developing grain, bracts removed (5 DPA)0.1179310.1842650.03939090.433964
CAR15Developing grain, bracts removed (15 DPA)0.06373830.03636560.04621030.345287



CDS Structure of MLOC_76890






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76890.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361624NoneNoneNoneNone
MLOC_76890.1CUST_496_PI427708083AvailableAvailablecontig_73362 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g13590.1 +3 3e-52 185 92/127 (72%) 13103.m01576 protein potyvirus VPg interacting protein, putative, expressed
TAIR PP10 AT1G14740.1 +3 1e-29 120 57/124 (46%) Protein of unknown function (DUF1423) | chr1:5075450-5077732 REVERSE LENGTH=733