MLOC_76840 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3856920.3199980.7796450.299278
LEAShoots from the seedlings (10 cm shoot stage)0.31503900.732330.34434
INF1Young developing inflorescences (5mm)0.171867000.172543
INF2Developing inflorescences (1-1.5 cm)0.367715000.436762
ROORoots from the seedlings (10 cm shoot stage)1.538870.3308421.167730.60997
NODDeveloping tillers at six leaf stage, 3rd internode00.3158850.1386950.984236
CAR5Developing grain, bracts removed (5 DPA)1.51561.491721.22851.02064
CAR15Developing grain, bracts removed (15 DPA)1.904832.625033.600174.02083



CDS Structure of MLOC_76840






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76840.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_76840.1CUST_13268_PI427708083AvailableAvailablecontig_73154 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g36774.1 +3 1e-29 115 55/65 (85%) 13108.m03864 protein zinc finger family protein, putative, expressed
TAIR PP10 AT5G22480.1 +3 1e-18 84 40/65 (62%) ZPR1 zinc-finger domain protein | chr5:7451643-7456168 REVERSE LENGTH=493