MLOC_76824 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.359150.9760781.048951.13027
LEAShoots from the seedlings (10 cm shoot stage)4.422567.929714.67957.45036
INF1Young developing inflorescences (5mm)0.6427180.7139660.5519840.554525
INF2Developing inflorescences (1-1.5 cm)0.325890.5084380.4647190.493071
ROORoots from the seedlings (10 cm shoot stage)1.851731.484541.286761.79738
NODDeveloping tillers at six leaf stage, 3rd internode3.283326.359237.1669519.0685
CAR5Developing grain, bracts removed (5 DPA)1.315391.771381.644371.58975
CAR15Developing grain, bracts removed (15 DPA)0.2855570.139550.2169330.538265



CDS Structure of MLOC_76824






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76824.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357444NoneNoneNoneNone
MLOC_76824.1CUST_6609_PI427708080AvailableAvailablecontig_73064 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g50080.1 -1 4e-100 317 208/255 (82%) 13103.m05444 protein peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed
TAIR PP10 AT1G18170.1 -1 3e-73 243 123/188 (65%) FKBP-like peptidyl-prolyl cis-trans isomerase family protein | chr1:6254291-6255507 FORWARD LENGTH=247