MLOC_76813 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains144.898117.74109.375130.164
LEAShoots from the seedlings (10 cm shoot stage)0.04299980.3278590.04109410.126933
INF1Young developing inflorescences (5mm)0.1587110.048975600.0999991
INF2Developing inflorescences (1-1.5 cm)0.1072780.07904010.05470250.101259
ROORoots from the seedlings (10 cm shoot stage)38.942342.75331.086753.4491
NODDeveloping tillers at six leaf stage, 3rd internode0.07995300.0219410.0242157
CAR5Developing grain, bracts removed (5 DPA)0.07364880.1138810.02596830.0825097
CAR15Developing grain, bracts removed (15 DPA)00.2227430.06653770.386468



CDS Structure of MLOC_76813






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76813.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365294NoneNoneNoneNone
MLOC_76813.1CUST_6608_PI427708080AvailableAvailablecontig_7302 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g03290.1 +2 0.0 574 307/414 (74%) 13111.m00267 protein nucleoside-triphosphatase, putative, expressed
TAIR PP10 AT3G04080.1 +2 6e-122 372 205/403 (51%) | Symbols: ATAPY1, APY1 | apyrase 1 | chr3:1068068-1070917 REVERSE LENGTH=471