- Predicted Gene MLOC_76805
MLOC_76805 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 7.39433 | 8.9846 | 7.23936 | 8.99421 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 20.9918 | 4.1568 | 5.6533 | 8.55496 |
| INF1 | Young developing inflorescences (5mm) | 16.8352 | 11.1822 | 9.08898 | 11.5775 |
| INF2 | Developing inflorescences (1-1.5 cm) | 9.63257 | 12.2752 | 11.5419 | 14.2692 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.623355 | 4.82841 | 6.00307 | 5.81422 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 5.08912 | 6.38601 | 7.93101 | 20.6072 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 10.0458 | 10.639 | 10.8111 | 12.1187 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.729021 | 0.447781 | 0.834951 | 1.76236 |
CDS Structure of MLOC_76805
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_76805.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g32100.1 |
+3 |
3e-170 |
504 |
358/540 (66%) |
13111.m03120 protein inducer of CBF expression 1, putative, expressed |
| TAIR PP10 |
AT3G26744.4 |
+3 |
8e-87 |
285 |
180/302 (60%) |
| Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr3:9832953-9834790 REVERSE LENGTH=494 |