MLOC_76795 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.863933.645154.925294.30595
LEAShoots from the seedlings (10 cm shoot stage)8.210421.19854.071533.57606
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)11.52219.091110.83489.45596
NODDeveloping tillers at six leaf stage, 3rd internode5.8381210.26020.42493918.8283
CAR5Developing grain, bracts removed (5 DPA)36.901936.857326.703131.636
CAR15Developing grain, bracts removed (15 DPA)1.466790.8534192.209133.42827



CDS Structure of MLOC_76795






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76795.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_76795.2CUST_16345_PI427708080AvailableAvailablecontig_72933 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g15780.1 -1 8e-91 283 172/249 (69%) 13109.m01497 protein expressed protein
TAIR PP10 AT5G46060.1 -1 1e-50 172 110/223 (49%) Protein of unknown function, DUF599 | chr5:18681533-18682459 FORWARD LENGTH=248