MLOC_76777 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.48492.277892.447832.74143
LEAShoots from the seedlings (10 cm shoot stage)4.622291.63372.744272.5027
INF1Young developing inflorescences (5mm)0.9962880.9953611.844281.23258
INF2Developing inflorescences (1-1.5 cm)0.178480.2280630.2133380.267663
ROORoots from the seedlings (10 cm shoot stage)9.747929.151614.3103510.3016
NODDeveloping tillers at six leaf stage, 3rd internode60.490156.579280.4194185.648
CAR5Developing grain, bracts removed (5 DPA)1.049141.024581.218241.23646
CAR15Developing grain, bracts removed (15 DPA)0.4149090.5997340.3748891.32682



CDS Structure of MLOC_76777






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76777.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250602.1NoneNoneNoneNone
AK364378NoneNoneNoneNone
MLOC_76777.3NoneAvailableAvailablecontig_72869 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g46610.1 +1 2e-75 162 77/97 (79%) 13105.m04980 protein myb-like DNA-binding domain containing protein, putative, expressed
TAIR PP10 AT5G26660.1 +1 2e-51 137 66/90 (73%) | Symbols: ATMYB86, MYB86 | myb domain protein 86 | chr5:9331775-9333044 REVERSE LENGTH=352