- Predicted Gene MLOC_76765
MLOC_76765 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.69639 | 1.57458 | 1.22196 | 1.51502 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.250898 | 0.27675 | 0.200246 | 0.198527 |
| INF1 | Young developing inflorescences (5mm) | 0.0426704 | 0.0950062 | 0.135902 | 0.0790578 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0719581 | 0.0390765 | 0.145303 | 0.0814518 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.299606 | 0.32485 | 0.264091 | 0.350816 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.829575 | 0.402565 | 0.623257 | 1.21017 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.80145 | 4.19366 | 4.32385 | 3.9739 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 73.9763 | 78.8881 | 74.3419 | 180.339 |
CDS Structure of MLOC_76765
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_76765.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g06390.1 |
-1 |
1e-37 |
142 |
98/164 (60%) |
13103.m00700 protein expressed protein |
| TAIR PP10 |
AT3G22530.1 |
-1 |
5e-19 |
89 |
67/148 (45%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14830.1); Has 77 Blast hits to 77 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:7977774-7978370 REVERSE LENGTH=198 |
