MLOC_76721 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.627026.759775.902126.96192
LEAShoots from the seedlings (10 cm shoot stage)4.313947.277040.1094713.31099
INF1Young developing inflorescences (5mm)10.216814.37497.3053210.1149
INF2Developing inflorescences (1-1.5 cm)8.037937.224379.113389.54297
ROORoots from the seedlings (10 cm shoot stage)67.589637.366353.085254.0467
NODDeveloping tillers at six leaf stage, 3rd internode0.9521360.441581.937292.30027
CAR5Developing grain, bracts removed (5 DPA)9.9460610.86417.1087810.2336
CAR15Developing grain, bracts removed (15 DPA)9.143910.35237.684324.2531



CDS Structure of MLOC_76721






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76721.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_76721.1CUST_16338_PI427708080AvailableAvailablecontig_72546 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g54240.1 +2 2e-29 109 77/90 (86%) 13104.m05607 protein wound induced protein, putative, expressed
TAIR PP10 AT4G10270.1 +2 1e-15 71 47/91 (52%) Wound-responsive family protein | chr4:6374805-6375077 FORWARD LENGTH=90