- Predicted Gene MLOC_76686
MLOC_76686 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 24.1747 | 26.8165 | 28.3034 | 25.1073 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 46.9139 | 14.3635 | 21.9694 | 23.6446 |
| INF1 | Young developing inflorescences (5mm) | 51.7646 | 49.1809 | 54.716 | 40.8142 |
| INF2 | Developing inflorescences (1-1.5 cm) | 27.3807 | 32.3235 | 37.3539 | 33.7856 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 25.9972 | 33.668 | 40.6173 | 38.0577 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 37.5184 | 25.3175 | 19.5002 | 76.0811 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 29.5767 | 30.8215 | 30.1966 | 28.6715 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 14.2045 | 13.5977 | 14.1526 | 30.8724 |
CDS Structure of MLOC_76686
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_76686.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g51290.1 |
+3 |
6e-103 |
305 |
159/187 (85%) |
13102.m05829 protein HVA22, putative, expressed |
| TAIR PP10 |
AT1G74520.1 |
+3 |
5e-70 |
220 |
100/149 (67%) |
| Symbols: ATHVA22A, HVA22A | HVA22 homologue A | chr1:28008109-28009156 REVERSE LENGTH=177 |
