MLOC_76680 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.250115.747714.264212.7689
LEAShoots from the seedlings (10 cm shoot stage)24.535626.02323.306418.9692
INF1Young developing inflorescences (5mm)50.20164.232268.421249.8995
INF2Developing inflorescences (1-1.5 cm)91.906382.335990.325994.5335
ROORoots from the seedlings (10 cm shoot stage)8.3661321.920320.321921.2519
NODDeveloping tillers at six leaf stage, 3rd internode18.082419.063926.663754.8713
CAR5Developing grain, bracts removed (5 DPA)33.566535.078829.547131.8524
CAR15Developing grain, bracts removed (15 DPA)13.186612.247211.517128.9847



CDS Structure of MLOC_76680






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76680.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_76680.2NoneAvailableAvailablecontig_72365 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g56110.2 +2 4e-59 213 121/209 (58%) 13102.m06443 protein AP-1 complex subunit gamma-1, putative, expressed
TAIR PP10 AT1G60070.1 +2 7e-47 176 94/209 (45%) Adaptor protein complex AP-1, gamma subunit | chr1:22142944-22149296 REVERSE LENGTH=862