- Predicted Gene MLOC_76600
MLOC_76600 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.00301 | 11.5356 | 11.5169 | 11.2505 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 15.9026 | 11.7055 | 5.82727 | 10.2247 |
| INF1 | Young developing inflorescences (5mm) | 10.235 | 15.4481 | 16.7178 | 12.9971 |
| INF2 | Developing inflorescences (1-1.5 cm) | 13.8092 | 14.1735 | 14.6277 | 16.8959 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.81556 | 6.0654 | 5.88336 | 8.1892 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 9.69304 | 6.3732 | 6.11774 | 23.6372 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 22.2667 | 22.4454 | 23.2729 | 24.7792 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 14.9905 | 14.426 | 16.1783 | 38.1736 |
CDS Structure of MLOC_76600
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_76600.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g02464.1 |
+2 |
0.0 |
848 |
402/447 (90%) |
13111.m00177 protein vacuolar-sorting receptor precursor, putative, expressed |
| TAIR PP10 |
AT3G52850.1 |
+2 |
0.0 |
748 |
344/442 (78%) |
| Symbols: VSR1, BP-80, ATELP, BP80, BP80B, ATELP1, ATVSR1, GFS1, VSR1;1, BP80-1;1 | vacuolar sorting receptor homolog 1 | chr3:19587999-19591690 FORWARD LENGTH=623 |