- Predicted Gene MLOC_76557
- Gene IDMLOC_76557
- Source Contig contig_718451
MLOC_76557 FPKM values
FPKM by Treatment | FPKM by Replicate |
---|---|
There are no FPKM-by-treatment values calculated for this gene. | ![]() |
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|---|---|---|---|---|
EMB | 4-day embryos dissected from germinating grains | 1.51081 | 1.96972 | 1.97756 | 0 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 2.44908 | 2.11625 | 0 |
INF1 | Young developing inflorescences (5mm) | 4.23769 | 6.23131 | 5.30606 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 7.76572 | 2.76551 | 8.46376 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.48766 | 0.720585 | 8.63765 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.68535 | 3.75142 | 1.81218 | 0 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.5629 | 3.49513 | 3.41163 | 0 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.0196 | 1.33898 | 1.882 | 0 |
CDS Structure of MLOC_76557
![](/morexGenes/blast_net_images/MLOC_76557_assembly3_WGSMorex_rbca.fasta_genes.png)
Members of Gene Cluster
This cluster has a confidence assignment of High Confidence.The gene has a transcript that is part of a cluster represented by AK251104.1
Cluster member | Probe ID | FPKM by replicate | FPKM by treatment | Source Contig |
---|---|---|---|---|
AK251104.1 | CUST_18949_PI427708080 | None | None | None |
MLOC_17797.1 | None | Available | None | contig_1578086 (Mapped) |
MLOC_27332.1 | None | Available | None | contig_1823075 (Mapped) |
MLOC_29898.1 | None | Available | None | contig_204773 (Mapped) |
MLOC_30057.1 | None | Available | None | contig_2060671 (Mapped) |
MLOC_32270.1 | None | Available | None | contig_227033 (Not mapped) |
MLOC_32287.1 | None | Available | None | contig_227167 (Mapped) |
MLOC_35059.1 | None | Available | None | contig_2454544 (Mapped) |
MLOC_41307.1 | None | Available | None | contig_2582023 (Not mapped) |
MLOC_48366.1 | None | Available | None | contig_322239 (Not mapped) |
MLOC_52104.1 | None | Available | None | contig_372875 (Not mapped) |
MLOC_52810.1 | None | Available | None | contig_378121 (Mapped) |
MLOC_66548.1 | None | Available | Available | contig_51741 (Mapped) |
MLOC_76557.1 | None | Available | None | contig_718451 (Not mapped) |
MLOC_78514.1 | None | Available | None | contig_806502 (Not mapped) |
MLOC_78671.1 | None | Available | None | contig_813667 (Not mapped) |
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|---|---|---|---|---|---|
Rice PP6 | None | - | - | - | - | - |
TAIR PP10 | None | - | - | - | - | - |