- Predicted Gene MLOC_76546
MLOC_76546 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.122435 | 0.103143 | 0.101028 | 0.11688 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 331.828 | 498.951 | 585.227 | 376.352 |
| INF1 | Young developing inflorescences (5mm) | 0.0782039 | 0.118096 | 0.050653 | 0.0794113 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0833112 | 0.0619861 | 0.10121 | 0.0929054 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.116493 | 0.164452 | 0.275205 | 0.1956 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.11705 | 2.56197 | 16.0986 | 14.4154 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 11.5367 | 15.4157 | 13.9549 | 14.6397 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 10.8268 | 14.022 | 9.32083 | 30.1732 |
CDS Structure of MLOC_76546
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_76546.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g03910.1 |
+1 |
0.0 |
970 |
446/488 (91%) |
13103.m00392 protein catalase domain containing protein, expressed |
| TAIR PP10 |
AT4G35090.1 |
+1 |
0.0 |
892 |
403/488 (83%) |
| Symbols: CAT2 | catalase 2 | chr4:16700937-16703215 REVERSE LENGTH=492 |
