MLOC_76480 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.60253.619473.645153.77583
LEAShoots from the seedlings (10 cm shoot stage)7.1633715.684148.216719.6318
INF1Young developing inflorescences (5mm)0.07548410.5636970.7115920.458496
INF2Developing inflorescences (1-1.5 cm)0.3589940.3096060.2772250.376904
ROORoots from the seedlings (10 cm shoot stage)38.022713.781720.353319.0625
NODDeveloping tillers at six leaf stage, 3rd internode0.09440170.219120.3313160.665022
CAR5Developing grain, bracts removed (5 DPA)0.5639110.794020.8930760.79648
CAR15Developing grain, bracts removed (15 DPA)0.2270590.2083390.1750140.554116



CDS Structure of MLOC_76480






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76480.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354210NoneNoneNoneNone
MLOC_76480.1CUST_6581_PI427708080AvailableAvailablecontig_71510 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g51930.1 +1 0.0 820 396/479 (83%) 13102.m05912 protein cytokinin-O-glucosyltransferase 2, putative, expressed
TAIR PP10 AT1G22380.1 +1 0.0 549 266/478 (56%) | Symbols: AtUGT85A3, UGT85A3 | UDP-glucosyl transferase 85A3 | chr1:7900522-7902332 REVERSE LENGTH=488