- Predicted Gene MLOC_76409
MLOC_76409 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 89.6639 | 68.9082 | 75.8107 | 87.8664 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 55.3451 | 54.7124 | 65.3868 | 54.3147 |
| INF1 | Young developing inflorescences (5mm) | 99.5305 | 115.197 | 134.44 | 108.407 |
| INF2 | Developing inflorescences (1-1.5 cm) | 120.155 | 102.552 | 128.517 | 135.655 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 89.8793 | 83.4416 | 90.5187 | 117.806 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 79.8173 | 129.161 | 157.088 | 431.229 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 67.7079 | 75.4584 | 68.6671 | 78.0927 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 79.5333 | 79.0972 | 68.2554 | 194.283 |
CDS Structure of MLOC_76409
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_76409.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g28680.1 |
+1 |
1e-117 |
341 |
156/182 (86%) |
13108.m02961 protein ubiquitin-conjugating enzyme, putative, expressed |
| TAIR PP10 |
AT4G36800.2 |
+1 |
8e-99 |
292 |
137/183 (75%) |
| Symbols: RCE1 | RUB1 conjugating enzyme 1 | chr4:17341237-17342148 REVERSE LENGTH=184 |