MLOC_7640 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)1.431691.555381.374381.65118
CAR15Developing grain, bracts removed (15 DPA)000.03688830.0815969



CDS Structure of MLOC_7640






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_7640.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_7640.1CUST_16300_PI427708080AvailableAvailablecontig_139751 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g17840.1 +2 2e-41 151 81/161 (50%) 13112.m01891 protein ubiquitin family protein, expressed
TAIR PP10 AT4G05230.1 +2 8e-19 85 47/91 (52%) Ubiquitin-like superfamily protein | chr4:2687003-2687623 FORWARD LENGTH=206