MLOC_7640 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_7640_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_7640_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0 | 0 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.43169 | 1.55538 | 1.37438 | 1.65118 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0.0368883 | 0.0815969 |
CDS Structure of MLOC_7640
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_7640.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g17840.1 |
+2 |
2e-41 |
151 |
81/161 (50%) |
13112.m01891 protein ubiquitin family protein, expressed |
TAIR PP10 |
AT4G05230.1 |
+2 |
8e-19 |
85 |
47/91 (52%) |
Ubiquitin-like superfamily protein | chr4:2687003-2687623 FORWARD LENGTH=206 |