MLOC_76397 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.03075140.1274190.2461820.14462
LEAShoots from the seedlings (10 cm shoot stage)0.17234300.1958850.11282
INF1Young developing inflorescences (5mm)0.2115110.2843150.2871080.255861
INF2Developing inflorescences (1-1.5 cm)0.7713120.5112140.6077350.77588
ROORoots from the seedlings (10 cm shoot stage)0.060430.2115060.1514440.241694
NODDeveloping tillers at six leaf stage, 3rd internode0.09269410.1955630.145980.533435
CAR5Developing grain, bracts removed (5 DPA)0.7069120.5438340.5317370.655955
CAR15Developing grain, bracts removed (15 DPA)1.6571.567971.39944.26648



CDS Structure of MLOC_76397






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76397.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_76397.2CUST_10209_PI427708083AvailableAvailablecontig_71249 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g65760.1 +3 3e-27 114 65/145 (45%) 13101.m07109 protein retrotransposon protein, putative, unclassified, expressed
TAIR PP10None-----