MLOC_76394 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8666980.6390081.012850.851533
LEAShoots from the seedlings (10 cm shoot stage)1.139531.975240.7917181.12817
INF1Young developing inflorescences (5mm)2.630265.143313.096643.51895
INF2Developing inflorescences (1-1.5 cm)6.268666.010696.474877.55692
ROORoots from the seedlings (10 cm shoot stage)11.675210.45747.437112.8102
NODDeveloping tillers at six leaf stage, 3rd internode0.9881153.533971.9994410.2515
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)000.02911410.0583062



CDS Structure of MLOC_76394






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_76394.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368619NoneNoneNoneNone
MLOC_76394.3CUST_6571_PI427708080AvailableAvailablecontig_7123 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g37180.1 +3 0.0 599 294/378 (78%) 13108.m03909 protein patatin, putative, expressed
TAIR PP10 AT2G26560.1 +3 3e-145 428 214/383 (56%) | Symbols: PLP2, PLA IIA, PLA2A | phospholipase A 2A | chr2:11293912-11295708 REVERSE LENGTH=407